MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF MA0072.1 RORA letter-probability matrix: alength= 4 w= 14 nsites= 36 E= 0 0.250000 0.222222 0.222222 0.305556 0.472222 0.055556 0.194444 0.277778 0.416667 0.000000 0.083333 0.500000 0.972222 0.027778 0.000000 0.000000 0.638889 0.000000 0.000000 0.361111 0.055556 0.333333 0.361111 0.250000 0.000000 0.000000 0.000000 1.000000 0.777778 0.000000 0.222222 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.416667 0.166667 0.277778 0.138889 URL https://jaspar.elixir.no/matrix/MA0072.1 MOTIF MA0072.2 RORA letter-probability matrix: alength= 4 w= 11 nsites= 36 E= 0 0.416667 0.000000 0.083333 0.500000 0.972222 0.027778 0.000000 0.000000 0.638889 0.000000 0.000000 0.361111 0.055556 0.333333 0.361111 0.250000 0.000000 0.000000 0.000000 1.000000 0.777778 0.000000 0.222222 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 URL https://jaspar.elixir.no/matrix/MA0072.2 MOTIF MA1150.1 RORB letter-probability matrix: alength= 4 w= 11 nsites= 1000 E= 0 0.785000 0.014000 0.029000 0.172000 0.525475 0.025974 0.023976 0.424575 0.233233 0.162162 0.201201 0.403403 0.053000 0.165000 0.235000 0.547000 0.602000 0.014000 0.358000 0.026000 0.016000 0.025000 0.907000 0.052000 0.032000 0.013000 0.928000 0.027000 0.028000 0.146000 0.050000 0.776000 0.047000 0.781000 0.017000 0.155000 0.896000 0.015000 0.063000 0.026000 0.205000 0.326000 0.145000 0.324000 URL https://jaspar.elixir.no/matrix/MA1150.1 MOTIF MA1150.2 RORB letter-probability matrix: alength= 4 w= 10 nsites= 1000 E= 0 0.785000 0.014000 0.029000 0.172000 0.525475 0.025974 0.023976 0.424575 0.233233 0.162162 0.201201 0.403403 0.053000 0.165000 0.235000 0.547000 0.602000 0.014000 0.358000 0.026000 0.016000 0.025000 0.907000 0.052000 0.032000 0.013000 0.928000 0.027000 0.028000 0.146000 0.050000 0.776000 0.047000 0.781000 0.017000 0.155000 0.896000 0.015000 0.063000 0.026000 URL https://jaspar.elixir.no/matrix/MA1150.2 MOTIF MA1151.1 RORC letter-probability matrix: alength= 4 w= 12 nsites= 1000 E= 0 0.306000 0.179000 0.260000 0.255000 0.329000 0.114000 0.141000 0.416000 0.855000 0.014000 0.011000 0.120000 0.527000 0.010000 0.032000 0.431000 0.225000 0.249000 0.277000 0.249000 0.043043 0.087087 0.116116 0.753754 0.622378 0.023976 0.342657 0.010989 0.005000 0.002000 0.919000 0.074000 0.036036 0.003003 0.952953 0.008008 0.059000 0.112000 0.168000 0.661000 0.006000 0.822000 0.019000 0.153000 0.785000 0.012000 0.161000 0.042000 URL https://jaspar.elixir.no/matrix/MA1151.1 MOTIF MA1151.2 RORC letter-probability matrix: alength= 4 w= 10 nsites= 1000 E= 0 0.855000 0.014000 0.011000 0.120000 0.527000 0.010000 0.032000 0.431000 0.225000 0.249000 0.277000 0.249000 0.043043 0.087087 0.116116 0.753754 0.622378 0.023976 0.342657 0.010989 0.005000 0.002000 0.919000 0.074000 0.036036 0.003003 0.952953 0.008008 0.059000 0.112000 0.168000 0.661000 0.006000 0.822000 0.019000 0.153000 0.785000 0.012000 0.161000 0.042000 URL https://jaspar.elixir.no/matrix/MA1151.2 MOTIF MA0371.1 ROX1 letter-probability matrix: alength= 4 w= 12 nsites= 8 E= 0 0.000000 0.500000 0.000000 0.500000 0.000000 0.750000 0.000000 0.250000 0.250000 0.500000 0.000000 0.250000 0.875000 0.125000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.125000 0.875000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.625000 0.125000 0.250000 0.125000 0.000000 0.125000 0.750000 0.000000 0.625000 0.250000 0.125000 URL https://jaspar.elixir.no/matrix/MA0371.1 MOTIF MA0372.1 RPH1 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 0 0.530000 0.140000 0.140000 0.190000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.636364 0.010101 0.070707 0.282828 0.732673 0.069307 0.069307 0.128713 URL https://jaspar.elixir.no/matrix/MA0372.1 MOTIF MA0372.2 RPH1 letter-probability matrix: alength= 4 w= 7 nsites= 100 E= 0 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.636364 0.010101 0.070707 0.282828 0.732673 0.069307 0.069307 0.128713 URL https://jaspar.elixir.no/matrix/MA0372.2 MOTIF MA0373.1 RPN4 letter-probability matrix: alength= 4 w= 7 nsites= 99 E= 0 0.232323 0.000000 0.676768 0.090909 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.120000 0.880000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.130000 0.000000 0.870000 0.000000 URL https://jaspar.elixir.no/matrix/MA0373.1