Detailed information of deep learning profile BP000001.1

This page shows detailed deep learning-derived predictions and motifs for REST in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000001.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000ATM
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.26e-04 -3.20e-04 -6.88e-04 -3.84e-05 9.77e-05 1.20e-01 -8.49e-05 1.32e-01 1.98e-05 -1.67e-03 1.57e-03 6.44e-04 -6.94e-04 ]
C [ 4.87e-03 2.87e-02 1.21e-03 6.36e-05 -2.30e-06 1.89e-04 1.10e-01 8.36e-04 -8.02e-06 6.22e-02 -1.59e-04 4.66e-02 5.95e-02 ]
G [ 2.71e-02 -2.71e-04 -5.61e-04 1.65e-01 1.70e-01 -8.60e-05 2.89e-04 -5.98e-06 1.74e-01 -2.45e-04 2.03e-02 1.10e-03 -4.14e-04 ]
T [ -1.70e-03 2.80e-03 5.30e-02 9.33e-07 1.71e-04 6.09e-04 -9.15e-05 -3.77e-05 4.84e-04 1.24e-04 2.45e-02 -9.95e-04 1.01e-03 ]

Frequency matrix

A [ 769 1511 681 89 169 4904 87 5295 64 689 1163 740 572 ]
C [ 2530 1715 648 14 4 262 4593 35 15 3595 133 3295 3761 ]
G [ 1424 901 590 5287 5228 62 546 28 5325 374 1992 1037 190 ]
T [ 689 1285 3493 22 11 184 186 54 8 754 2124 340 889 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
BP000383.1 REST ENCSR867WPH liver Homo sapiens
Showing 10 profiles of page 2 from 3 pages