Detailed information of deep learning profile BP000001.1

This page shows detailed deep learning-derived predictions and motifs for REST in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000001.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000ATM
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.26e-04 -3.20e-04 -6.88e-04 -3.84e-05 9.77e-05 1.20e-01 -8.49e-05 1.32e-01 1.98e-05 -1.67e-03 1.57e-03 6.44e-04 -6.94e-04 ]
C [ 4.87e-03 2.87e-02 1.21e-03 6.36e-05 -2.30e-06 1.89e-04 1.10e-01 8.36e-04 -8.02e-06 6.22e-02 -1.59e-04 4.66e-02 5.95e-02 ]
G [ 2.71e-02 -2.71e-04 -5.61e-04 1.65e-01 1.70e-01 -8.60e-05 2.89e-04 -5.98e-06 1.74e-01 -2.45e-04 2.03e-02 1.10e-03 -4.14e-04 ]
T [ -1.70e-03 2.80e-03 5.30e-02 9.33e-07 1.71e-04 6.09e-04 -9.15e-05 -3.77e-05 4.84e-04 1.24e-04 2.45e-02 -9.95e-04 1.01e-03 ]

Frequency matrix

A [ 769 1511 681 89 169 4904 87 5295 64 689 1163 740 572 ]
C [ 2530 1715 648 14 4 262 4593 35 15 3595 133 3295 3761 ]
G [ 1424 901 590 5287 5228 62 546 28 5325 374 1992 1037 190 ]
T [ 689 1285 3493 22 11 184 186 54 8 754 2124 340 889 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages