Detailed information of deep learning profile BP000001.1

This page shows detailed deep learning-derived predictions and motifs for REST in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000001.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000ATM
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.26e-04 -3.20e-04 -6.88e-04 -3.84e-05 9.77e-05 1.20e-01 -8.49e-05 1.32e-01 1.98e-05 -1.67e-03 1.57e-03 6.44e-04 -6.94e-04 ]
C [ 4.87e-03 2.87e-02 1.21e-03 6.36e-05 -2.30e-06 1.89e-04 1.10e-01 8.36e-04 -8.02e-06 6.22e-02 -1.59e-04 4.66e-02 5.95e-02 ]
G [ 2.71e-02 -2.71e-04 -5.61e-04 1.65e-01 1.70e-01 -8.60e-05 2.89e-04 -5.98e-06 1.74e-01 -2.45e-04 2.03e-02 1.10e-03 -4.14e-04 ]
T [ -1.70e-03 2.80e-03 5.30e-02 9.33e-07 1.71e-04 6.09e-04 -9.15e-05 -3.77e-05 4.84e-04 1.24e-04 2.45e-02 -9.95e-04 1.01e-03 ]

Frequency matrix

A [ 769 1511 681 89 169 4904 87 5295 64 689 1163 740 572 ]
C [ 2530 1715 648 14 4 262 4593 35 15 3595 133 3295 3761 ]
G [ 1424 901 590 5287 5228 62 546 28 5325 374 1992 1037 190 ]
T [ 689 1285 3493 22 11 184 186 54 8 754 2124 340 889 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
Showing 10 profiles of page 1 from 3 pages