Detailed information of deep learning profile BP000004.1

This page shows detailed deep learning-derived predictions and motifs for REST in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000004.1
Cell line/tissue: H1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BHM
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.82e-04 -1.79e-03 9.69e-03 -5.83e-04 3.20e-06 -5.25e-05 -2.95e-04 -1.56e-04 4.28e-05 -5.26e-06 5.63e-02 2.76e-03 -1.24e-03 4.38e-03 -1.41e-03 ]
C [ -8.05e-04 2.96e-03 2.11e-02 -1.37e-03 1.63e-01 -7.43e-06 1.21e-03 -9.71e-05 1.77e-01 1.79e-01 -1.09e-03 6.30e-04 2.26e-02 2.93e-04 7.10e-03 ]
G [ 4.99e-02 3.54e-02 -6.51e-04 7.45e-02 -9.02e-06 1.31e-04 8.94e-02 9.27e-05 9.44e-05 -1.13e-06 1.74e-03 2.19e-02 2.40e-02 4.63e-02 5.56e-03 ]
T [ -1.62e-03 3.22e-04 2.79e-03 -2.81e-03 1.74e-05 1.36e-01 -2.44e-04 1.20e-01 7.69e-05 -5.09e-05 -2.15e-03 2.79e-03 2.66e-04 2.84e-03 3.21e-02 ]

Frequency matrix

A [ 2467 1066 4058 1484 24 171 548 370 22 27 8482 3027 1952 2603 1734 ]
C [ 915 3180 4301 912 12582 79 1547 97 12499 12593 1496 2253 4074 2306 3200 ]
G [ 7711 6330 545 8976 18 68 9902 532 3 29 1122 4624 4454 5371 2850 ]
T [ 1645 2162 3834 1366 114 12420 741 11739 214 89 1639 2834 2258 2458 4954 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
BP000383.1 REST ENCSR867WPH liver Homo sapiens
Showing 10 profiles of page 2 from 3 pages