Detailed information of deep learning profile BP000004.1

This page shows detailed deep learning-derived predictions and motifs for REST in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000004.1
Cell line/tissue: H1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BHM
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.82e-04 -1.79e-03 9.69e-03 -5.83e-04 3.20e-06 -5.25e-05 -2.95e-04 -1.56e-04 4.28e-05 -5.26e-06 5.63e-02 2.76e-03 -1.24e-03 4.38e-03 -1.41e-03 ]
C [ -8.05e-04 2.96e-03 2.11e-02 -1.37e-03 1.63e-01 -7.43e-06 1.21e-03 -9.71e-05 1.77e-01 1.79e-01 -1.09e-03 6.30e-04 2.26e-02 2.93e-04 7.10e-03 ]
G [ 4.99e-02 3.54e-02 -6.51e-04 7.45e-02 -9.02e-06 1.31e-04 8.94e-02 9.27e-05 9.44e-05 -1.13e-06 1.74e-03 2.19e-02 2.40e-02 4.63e-02 5.56e-03 ]
T [ -1.62e-03 3.22e-04 2.79e-03 -2.81e-03 1.74e-05 1.36e-01 -2.44e-04 1.20e-01 7.69e-05 -5.09e-05 -2.15e-03 2.79e-03 2.66e-04 2.84e-03 3.21e-02 ]

Frequency matrix

A [ 2467 1066 4058 1484 24 171 548 370 22 27 8482 3027 1952 2603 1734 ]
C [ 915 3180 4301 912 12582 79 1547 97 12499 12593 1496 2253 4074 2306 3200 ]
G [ 7711 6330 545 8976 18 68 9902 532 3 29 1122 4624 4454 5371 2850 ]
T [ 1645 2162 3834 1366 114 12420 741 11739 214 89 1639 2834 2258 2458 4954 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages