Detailed information of deep learning profile BP000004.1

This page shows detailed deep learning-derived predictions and motifs for REST in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000004.1
Cell line/tissue: H1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BHM
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.21e-02 2.84e-03 2.66e-04 2.79e-03 -2.15e-03 -5.09e-05 7.69e-05 1.20e-01 -2.44e-04 1.36e-01 1.74e-05 -2.81e-03 2.79e-03 3.22e-04 -1.62e-03 ]
C [ 5.56e-03 4.63e-02 2.40e-02 2.19e-02 1.74e-03 -1.13e-06 9.44e-05 9.27e-05 8.94e-02 1.31e-04 -9.02e-06 7.45e-02 -6.51e-04 3.54e-02 4.99e-02 ]
G [ 7.10e-03 2.93e-04 2.26e-02 6.30e-04 -1.09e-03 1.79e-01 1.77e-01 -9.71e-05 1.21e-03 -7.43e-06 1.63e-01 -1.37e-03 2.11e-02 2.96e-03 -8.05e-04 ]
T [ -1.41e-03 4.38e-03 -1.24e-03 2.76e-03 5.63e-02 -5.26e-06 4.28e-05 -1.56e-04 -2.95e-04 -5.25e-05 3.20e-06 -5.83e-04 9.69e-03 -1.79e-03 4.82e-04 ]

Frequency matrix

A [ 4954 2458 2258 2834 1639 89 214 11739 741 12420 114 1366 3834 2162 1645 ]
C [ 2850 5371 4454 4624 1122 29 3 532 9902 68 18 8976 545 6330 7711 ]
G [ 3200 2306 4074 2253 1496 12593 12499 97 1547 79 12582 912 4301 3180 915 ]
T [ 1734 2603 1952 3027 8482 27 22 370 548 171 24 1484 4058 1066 2467 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
Showing 10 profiles of page 1 from 3 pages