Detailed information of deep learning profile BP000004.1

This page shows detailed deep learning-derived predictions and motifs for REST in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000004.1
Cell line/tissue: H1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BHM
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.82e-04 -1.79e-03 9.69e-03 -5.83e-04 3.20e-06 -5.25e-05 -2.95e-04 -1.56e-04 4.28e-05 -5.26e-06 5.63e-02 2.76e-03 -1.24e-03 4.38e-03 -1.41e-03 ]
C [ -8.05e-04 2.96e-03 2.11e-02 -1.37e-03 1.63e-01 -7.43e-06 1.21e-03 -9.71e-05 1.77e-01 1.79e-01 -1.09e-03 6.30e-04 2.26e-02 2.93e-04 7.10e-03 ]
G [ 4.99e-02 3.54e-02 -6.51e-04 7.45e-02 -9.02e-06 1.31e-04 8.94e-02 9.27e-05 9.44e-05 -1.13e-06 1.74e-03 2.19e-02 2.40e-02 4.63e-02 5.56e-03 ]
T [ -1.62e-03 3.22e-04 2.79e-03 -2.81e-03 1.74e-05 1.36e-01 -2.44e-04 1.20e-01 7.69e-05 -5.09e-05 -2.15e-03 2.79e-03 2.66e-04 2.84e-03 3.21e-02 ]

Frequency matrix

A [ 2467 1066 4058 1484 24 171 548 370 22 27 8482 3027 1952 2603 1734 ]
C [ 915 3180 4301 912 12582 79 1547 97 12499 12593 1496 2253 4074 2306 3200 ]
G [ 7711 6330 545 8976 18 68 9902 532 3 29 1122 4624 4454 5371 2850 ]
T [ 1645 2162 3834 1366 114 12420 741 11739 214 89 1639 2834 2258 2458 4954 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
Showing 10 profiles of page 1 from 3 pages