Detailed information of deep learning profile BP000006.1

This page shows detailed deep learning-derived predictions and motifs for REST in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000006.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BJL
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.27e-04 -7.20e-04 2.53e-02 -1.40e-03 1.82e-04 -1.67e-04 -1.58e-04 8.29e-04 7.26e-04 -3.60e-05 5.43e-02 -3.20e-03 -3.13e-03 ]
C [ 1.28e-04 1.38e-03 2.70e-02 -3.84e-04 2.07e-01 5.86e-04 5.01e-04 4.98e-04 1.87e-01 2.05e-01 -9.93e-04 7.70e-03 2.84e-02 ]
G [ 8.56e-02 8.61e-02 1.79e-04 9.63e-02 8.30e-05 4.79e-04 1.54e-01 9.20e-04 2.38e-04 3.64e-04 6.78e-03 1.87e-02 1.67e-02 ]
T [ -1.43e-03 -7.98e-04 9.76e-04 -2.37e-03 -1.91e-04 1.49e-01 -5.78e-05 1.41e-01 9.10e-05 -8.95e-05 -2.84e-03 7.49e-04 -2.17e-03 ]

Frequency matrix

A [ 260 57 903 224 7 17 40 71 20 5 1345 392 231 ]
C [ 27 278 657 111 1958 7 135 13 1932 1950 129 310 486 ]
G [ 1559 1470 38 1454 2 24 1796 74 4 5 268 665 1048 ]
T [ 132 173 380 189 11 1930 7 1820 22 18 236 611 213 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
Showing 10 profiles of page 1 from 3 pages