Detailed information of deep learning profile BP000007.1

This page shows detailed deep learning-derived predictions and motifs for REST in Panc1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000007.1
Cell line/tissue: Panc1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BJO
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.74e-04 -7.10e-04 1.39e-02 2.01e-04 3.86e-05 1.70e-04 -6.64e-05 4.82e-04 8.54e-04 1.71e-04 4.92e-02 -6.27e-04 -2.01e-03 ]
C [ -1.12e-04 1.41e-03 2.04e-02 -5.46e-04 1.33e-01 2.85e-06 7.15e-05 1.58e-04 1.17e-01 1.29e-01 -4.76e-04 3.64e-03 3.15e-02 ]
G [ 4.70e-02 4.58e-02 -1.72e-04 6.16e-02 0.00e+00 2.70e-04 1.07e-01 8.45e-04 4.81e-05 1.20e-05 4.03e-03 2.44e-02 3.97e-03 ]
T [ -5.22e-04 -4.33e-04 1.52e-03 -1.75e-03 1.38e-05 1.11e-01 -7.29e-06 9.44e-02 -3.86e-05 -2.09e-05 -1.08e-03 -1.52e-04 3.28e-04 ]

Frequency matrix

A [ 486 171 1360 357 5 13 38 123 23 5 2385 727 431 ]
C [ 124 703 1499 247 3572 21 184 49 3505 3569 320 652 1034 ]
G [ 2682 2359 95 2606 5 20 3377 233 5 12 544 1335 1723 ]
T [ 317 376 655 399 27 3555 10 3204 76 23 360 895 421 ]

Alternative motif patterns (AMPs)

Other motif patterns

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
BP000383.1 REST ENCSR867WPH liver Homo sapiens
Showing 10 profiles of page 2 from 3 pages