Detailed information of deep learning profile BP000007.1

This page shows detailed deep learning-derived predictions and motifs for REST in Panc1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000007.1
Cell line/tissue: Panc1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BJO
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.74e-04 -7.10e-04 1.39e-02 2.01e-04 3.86e-05 1.70e-04 -6.64e-05 4.82e-04 8.54e-04 1.71e-04 4.92e-02 -6.27e-04 -2.01e-03 ]
C [ -1.12e-04 1.41e-03 2.04e-02 -5.46e-04 1.33e-01 2.85e-06 7.15e-05 1.58e-04 1.17e-01 1.29e-01 -4.76e-04 3.64e-03 3.15e-02 ]
G [ 4.70e-02 4.58e-02 -1.72e-04 6.16e-02 0.00e+00 2.70e-04 1.07e-01 8.45e-04 4.81e-05 1.20e-05 4.03e-03 2.44e-02 3.97e-03 ]
T [ -5.22e-04 -4.33e-04 1.52e-03 -1.75e-03 1.38e-05 1.11e-01 -7.29e-06 9.44e-02 -3.86e-05 -2.09e-05 -1.08e-03 -1.52e-04 3.28e-04 ]

Frequency matrix

A [ 486 171 1360 357 5 13 38 123 23 5 2385 727 431 ]
C [ 124 703 1499 247 3572 21 184 49 3505 3569 320 652 1034 ]
G [ 2682 2359 95 2606 5 20 3377 233 5 12 544 1335 1723 ]
T [ 317 376 655 399 27 3555 10 3204 76 23 360 895 421 ]

Alternative motif patterns (AMPs)

Other motif patterns

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages