Detailed information of deep learning profile BP000008.1

This page shows detailed deep learning-derived predictions and motifs for SP1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP1
Model ID: BP000008.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0079.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: M9PJG1  
Source: ENCSR000BJX
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.44e-04 -5.90e-05 -1.13e-04 4.45e-05 0.00e+00 -2.78e-04 0.00e+00 0.00e+00 0.00e+00 8.15e-05 -1.29e-04 ]
C [ 6.83e-05 6.83e-03 9.51e-03 1.55e-02 2.46e-02 8.31e-05 2.73e-02 2.59e-02 1.94e-02 9.03e-03 5.59e-03 ]
G [ 8.34e-03 -4.96e-05 0.00e+00 0.00e+00 1.28e-05 1.48e-02 0.00e+00 0.00e+00 0.00e+00 -1.63e-05 -3.65e-05 ]
T [ -2.93e-04 -7.83e-05 3.42e-04 -2.83e-05 -1.59e-05 -6.58e-04 0.00e+00 0.00e+00 5.01e-05 -1.13e-04 4.02e-04 ]

Frequency matrix

A [ 5835 3036 2273 2642 118 3458 22 5 250 5199 4264 ]
C [ 10611 28776 30547 37621 40913 2939 42818 42881 37822 30111 24007 ]
G [ 20064 5709 3489 2095 1595 28614 263 94 956 2680 6176 ]
T [ 6635 5625 6836 787 519 8133 42 165 4117 5155 8697 ]

6 profiles found for the same TF (SP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000012.1 SP1 ENCSR000BKO K562 Homo sapiens
BP000026.1 SP1 ENCSR000BPE A549 Homo sapiens
BP000067.1 SP1 ENCSR085IXF liver Homo sapiens
BP000141.1 SP1 ENCSR583CGO WTC11 Homo sapiens
BP000286.1 SP1 ENCSR000BIR H1 Homo sapiens
BP001069.1 SP1 ENCSR991ELG K562 Homo sapiens
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