Detailed information of deep learning profile BP000008.1

This page shows detailed deep learning-derived predictions and motifs for SP1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP1
Model ID: BP000008.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0079.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: M9PJG1  
Source: ENCSR000BJX
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.02e-04 -1.13e-04 5.01e-05 0.00e+00 0.00e+00 -6.58e-04 -1.59e-05 -2.83e-05 3.42e-04 -7.83e-05 -2.93e-04 ]
C [ -3.65e-05 -1.63e-05 0.00e+00 0.00e+00 0.00e+00 1.48e-02 1.28e-05 0.00e+00 0.00e+00 -4.96e-05 8.34e-03 ]
G [ 5.59e-03 9.03e-03 1.94e-02 2.59e-02 2.73e-02 8.31e-05 2.46e-02 1.55e-02 9.51e-03 6.83e-03 6.83e-05 ]
T [ -1.29e-04 8.15e-05 0.00e+00 0.00e+00 0.00e+00 -2.78e-04 0.00e+00 4.45e-05 -1.13e-04 -5.90e-05 2.44e-04 ]

Frequency matrix

A [ 8697 5155 4117 165 42 8133 519 787 6836 5625 6635 ]
C [ 6176 2680 956 94 263 28614 1595 2095 3489 5709 20064 ]
G [ 24007 30111 37822 42881 42818 2939 40913 37621 30547 28776 10611 ]
T [ 4264 5199 250 5 22 3458 118 2642 2273 3036 5835 ]

6 profiles found for the same TF (SP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000012.1 SP1 ENCSR000BKO K562 Homo sapiens
BP000026.1 SP1 ENCSR000BPE A549 Homo sapiens
BP000067.1 SP1 ENCSR085IXF liver Homo sapiens
BP000141.1 SP1 ENCSR583CGO WTC11 Homo sapiens
BP000286.1 SP1 ENCSR000BIR H1 Homo sapiens
BP001069.1 SP1 ENCSR991ELG K562 Homo sapiens
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