Detailed information of deep learning profile BP000011.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in GM12891 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000011.1
Cell line/tissue: GM12891
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR000BKJ
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.31e-04 -1.07e-03 -1.83e-03 -3.64e-04 -9.56e-05 1.45e-06 9.37e-02 0.00e+00 -2.63e-04 9.89e-04 -3.87e-04 ]
C [ -7.56e-04 2.30e-02 2.04e-02 -1.07e-04 6.25e-02 7.74e-02 3.41e-07 1.04e-05 1.39e-03 -7.54e-04 2.34e-03 ]
G [ 2.27e-02 4.41e-04 2.20e-03 5.67e-02 -5.81e-06 2.12e-06 6.96e-06 2.15e-06 3.88e-04 1.42e-03 -2.13e-04 ]
T [ -8.73e-04 -1.16e-03 -1.48e-03 -9.09e-04 -2.71e-05 -4.81e-08 0.00e+00 9.29e-02 4.31e-03 1.92e-02 2.46e-02 ]

Frequency matrix

A [ 3378 3311 5914 2171 1066 193 24860 25 1754 4092 2202 ]
C [ 3679 13959 11487 1047 23123 24477 12 15 6208 2839 7218 ]
G [ 13185 4705 4890 18375 231 110 9 4 6985 5328 2936 ]
T [ 4642 2910 2592 3290 464 104 3 24840 9937 12625 12528 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000033.1 YY1 ENCSR000BSY Ishikawa Homo sapiens
BP000047.1 YY1 ENCSR000EUM GM12878 Homo sapiens
BP000051.1 YY1 ENCSR000EWF K562 Homo sapiens
BP000054.1 YY1 ENCSR000EXG NT2/D1 Homo sapiens
BP000112.1 YY1 ENCSR382MOM liver Homo sapiens
BP000176.1 YY1 ENCSR859RAO HEK293 Homo sapiens
BP000190.1 YY1 ENCSR994YLZ liver Homo sapiens
Showing 7 profiles of page 2 from 2 pages