Detailed information of deep learning profile BP000012.1

This page shows detailed deep learning-derived predictions and motifs for SP1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP1
Model ID: BP000012.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0079.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: M9PJG1  
Source: ENCSR000BKO
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.73e-05 -6.99e-05 4.08e-06 0.00e+00 -4.47e-06 1.00e-05 0.00e+00 2.25e-04 1.24e-04 -2.21e-06 -4.54e-05 -9.47e-05 5.65e-04 1.17e-03 3.38e-04 1.17e-04 1.80e-04 4.97e-05 3.05e-04 3.73e-04 3.49e-04 8.49e-05 2.23e-04 3.80e-04 9.00e-04 1.41e-03 ]
C [ 3.45e-07 1.02e-06 3.99e-06 4.86e-05 8.28e-03 0.00e+00 2.61e-05 9.96e-06 -9.58e-06 4.08e-03 1.70e-03 -1.03e-04 -2.38e-04 -1.78e-04 4.38e-04 9.91e-04 3.64e-04 1.24e-04 5.77e-06 2.17e-04 7.61e-04 6.65e-04 1.31e-03 7.12e-04 3.13e-04 4.68e-04 ]
G [ 3.85e-03 6.51e-03 8.24e-03 8.41e-03 2.32e-04 1.08e-02 6.39e-03 3.56e-03 3.77e-03 1.56e-04 1.02e-03 1.60e-03 1.34e-03 9.25e-04 2.97e-04 5.63e-04 1.44e-03 1.85e-03 2.20e-03 1.32e-03 1.00e-03 1.09e-03 1.16e-03 1.11e-03 4.58e-04 7.77e-04 ]
T [ 2.73e-04 -5.39e-06 -7.54e-07 1.43e-05 -1.32e-05 0.00e+00 -6.36e-05 1.67e-05 -7.75e-07 5.84e-05 5.48e-06 2.20e-04 6.65e-05 9.04e-05 5.02e-04 1.57e-04 1.41e-04 4.54e-05 2.39e-04 3.86e-04 5.93e-05 -6.24e-05 1.10e-04 1.47e-04 2.58e-04 2.69e-04 ]

Frequency matrix

A [ 1915 1570 361 88 770 2 330 3520 3049 2672 2374 4440 3902 4319 4147 3444 3636 3598 3645 3792 3701 3554 3378 3615 3571 3513 ]
C [ 1599 1146 622 600 18711 14 624 1306 1665 11030 7926 3416 3899 4304 4747 5306 4917 4695 4728 4978 5241 5281 5311 5232 5477 5644 ]
G [ 13991 17000 19018 19349 327 20045 17624 14305 14176 3921 5712 7366 9380 8893 8152 8186 8188 8528 8687 8187 7999 8093 8148 7995 7907 7559 ]
T [ 2560 350 65 29 258 5 1488 936 1175 2443 4054 4844 2885 2550 3020 3130 3325 3245 3006 3109 3125 3138 3229 3223 3111 3351 ]

6 profiles found for the same TF (SP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000008.1 SP1 ENCSR000BJX HepG2 Homo sapiens
BP000026.1 SP1 ENCSR000BPE A549 Homo sapiens
BP000067.1 SP1 ENCSR085IXF liver Homo sapiens
BP000141.1 SP1 ENCSR583CGO WTC11 Homo sapiens
BP000286.1 SP1 ENCSR000BIR H1 Homo sapiens
BP001069.1 SP1 ENCSR991ELG K562 Homo sapiens
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