Detailed information of deep learning profile BP000012.1

This page shows detailed deep learning-derived predictions and motifs for SP1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP1
Model ID: BP000012.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0079.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: M9PJG1  
Source: ENCSR000BKO
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.69e-04 2.58e-04 1.47e-04 1.10e-04 -6.24e-05 5.93e-05 3.86e-04 2.39e-04 4.54e-05 1.41e-04 1.57e-04 5.02e-04 9.04e-05 6.65e-05 2.20e-04 5.48e-06 5.84e-05 -7.75e-07 1.67e-05 -6.36e-05 0.00e+00 -1.32e-05 1.43e-05 -7.54e-07 -5.39e-06 2.73e-04 ]
C [ 7.77e-04 4.58e-04 1.11e-03 1.16e-03 1.09e-03 1.00e-03 1.32e-03 2.20e-03 1.85e-03 1.44e-03 5.63e-04 2.97e-04 9.25e-04 1.34e-03 1.60e-03 1.02e-03 1.56e-04 3.77e-03 3.56e-03 6.39e-03 1.08e-02 2.32e-04 8.41e-03 8.24e-03 6.51e-03 3.85e-03 ]
G [ 4.68e-04 3.13e-04 7.12e-04 1.31e-03 6.65e-04 7.61e-04 2.17e-04 5.77e-06 1.24e-04 3.64e-04 9.91e-04 4.38e-04 -1.78e-04 -2.38e-04 -1.03e-04 1.70e-03 4.08e-03 -9.58e-06 9.96e-06 2.61e-05 0.00e+00 8.28e-03 4.86e-05 3.99e-06 1.02e-06 3.45e-07 ]
T [ 1.41e-03 9.00e-04 3.80e-04 2.23e-04 8.49e-05 3.49e-04 3.73e-04 3.05e-04 4.97e-05 1.80e-04 1.17e-04 3.38e-04 1.17e-03 5.65e-04 -9.47e-05 -4.54e-05 -2.21e-06 1.24e-04 2.25e-04 0.00e+00 1.00e-05 -4.47e-06 0.00e+00 4.08e-06 -6.99e-05 -4.73e-05 ]

Frequency matrix

A [ 3351 3111 3223 3229 3138 3125 3109 3006 3245 3325 3130 3020 2550 2885 4844 4054 2443 1175 936 1488 5 258 29 65 350 2560 ]
C [ 7559 7907 7995 8148 8093 7999 8187 8687 8528 8188 8186 8152 8893 9380 7366 5712 3921 14176 14305 17624 20045 327 19349 19018 17000 13991 ]
G [ 5644 5477 5232 5311 5281 5241 4978 4728 4695 4917 5306 4747 4304 3899 3416 7926 11030 1665 1306 624 14 18711 600 622 1146 1599 ]
T [ 3513 3571 3615 3378 3554 3701 3792 3645 3598 3636 3444 4147 4319 3902 4440 2374 2672 3049 3520 330 2 770 88 361 1570 1915 ]

6 profiles found for the same TF (SP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000008.1 SP1 ENCSR000BJX HepG2 Homo sapiens
BP000026.1 SP1 ENCSR000BPE A549 Homo sapiens
BP000067.1 SP1 ENCSR085IXF liver Homo sapiens
BP000141.1 SP1 ENCSR583CGO WTC11 Homo sapiens
BP000286.1 SP1 ENCSR000BIR H1 Homo sapiens
BP001069.1 SP1 ENCSR991ELG K562 Homo sapiens
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