Detailed information of deep learning profile BP000015.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000015.1
Cell line/tissue: SK-N-SH
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR000BLZ
Model: BPNet

Contribution weight matrix (CWM)

A [ -7.06e-04 -5.59e-04 -1.77e-03 -3.72e-04 -8.88e-05 -8.44e-07 9.32e-02 -2.00e-07 -1.98e-04 1.45e-03 -3.11e-04 ]
C [ -8.48e-04 2.73e-02 1.99e-02 -5.86e-05 7.01e-02 8.09e-02 6.96e-07 8.66e-08 1.32e-03 -6.90e-04 2.11e-03 ]
G [ 2.51e-02 -1.01e-05 2.09e-03 6.26e-02 -2.01e-06 3.51e-06 2.33e-07 -2.73e-07 -3.08e-04 5.40e-04 -1.21e-04 ]
T [ -5.41e-04 -1.46e-03 -1.47e-03 -5.77e-04 -1.54e-05 -1.70e-06 0.00e+00 9.41e-02 5.90e-03 2.33e-02 2.87e-02 ]

Frequency matrix

A [ 4608 4791 8702 2344 1315 94 29303 7 2689 5744 3008 ]
C [ 3880 16543 11713 398 27547 29069 33 20 6747 3049 7213 ]
G [ 15277 4551 4946 21431 146 89 16 6 7001 4698 3587 ]
T [ 5593 3473 3996 5186 350 106 6 29325 12921 15867 15551 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000009.1 YY1 ENCSR000BKD H1 Homo sapiens
BP000011.1 YY1 ENCSR000BKJ GM12891 Homo sapiens
BP000013.1 YY1 ENCSR000BKU K562 Homo sapiens
BP000014.1 YY1 ENCSR000BLT GM12892 Homo sapiens
BP000016.1 YY1 ENCSR000BMH K562 Homo sapiens
BP000020.1 YY1 ENCSR000BNP GM12878 Homo sapiens
BP000021.1 YY1 ENCSR000BNT HepG2 Homo sapiens
BP000022.1 YY1 ENCSR000BNX HCT116 Homo sapiens
BP000028.1 YY1 ENCSR000BPM A549 Homo sapiens
BP000031.1 YY1 ENCSR000BSM SK-N-SH Homo sapiens
Showing 10 profiles of page 1 from 2 pages