Detailed information of deep learning profile BP000016.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000016.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR000BMH
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.25e-02 2.84e-02 5.72e-03 1.12e-01 0.00e+00 -1.62e-06 -9.19e-06 -1.08e-03 -2.78e-03 -1.85e-03 -1.68e-03 ]
C [ -1.14e-04 1.15e-03 1.07e-03 0.00e+00 8.34e-06 0.00e+00 -5.39e-06 7.25e-02 4.17e-03 9.78e-04 3.03e-02 ]
G [ 3.70e-03 -9.55e-04 2.36e-03 1.19e-05 -1.35e-06 1.08e-01 8.85e-02 -1.34e-04 2.95e-02 3.24e-02 -8.75e-04 ]
T [ -5.92e-04 1.01e-03 -6.81e-04 4.84e-07 1.11e-01 -2.29e-07 -1.34e-04 -9.86e-04 -3.39e-03 -1.52e-03 -1.02e-03 ]

Frequency matrix

A [ 23114 22909 16608 41064 2 22 295 6009 4771 5033 7159 ]
C [ 4515 7169 11303 6 6 41 185 29783 8522 6897 22646 ]
G [ 10441 4484 10389 78 27 41078 39587 1434 17827 23568 5501 ]
T [ 3088 6596 2858 10 41123 17 1091 3931 10039 5661 5852 ]

Other motif patterns

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000009.1 YY1 ENCSR000BKD H1 Homo sapiens
BP000011.1 YY1 ENCSR000BKJ GM12891 Homo sapiens
BP000013.1 YY1 ENCSR000BKU K562 Homo sapiens
BP000014.1 YY1 ENCSR000BLT GM12892 Homo sapiens
BP000015.1 YY1 ENCSR000BLZ SK-N-SH Homo sapiens
BP000020.1 YY1 ENCSR000BNP GM12878 Homo sapiens
BP000021.1 YY1 ENCSR000BNT HepG2 Homo sapiens
BP000022.1 YY1 ENCSR000BNX HCT116 Homo sapiens
BP000028.1 YY1 ENCSR000BPM A549 Homo sapiens
BP000031.1 YY1 ENCSR000BSM SK-N-SH Homo sapiens
Showing 10 profiles of page 1 from 2 pages