Detailed information of deep learning profile BP000017.1

This page shows detailed deep learning-derived predictions and motifs for REST in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000017.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BMW
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.23e-04 -1.05e-03 1.16e-02 2.40e-04 -1.24e-05 4.79e-05 2.67e-04 2.10e-04 3.52e-05 -1.86e-07 5.14e-02 2.72e-03 -6.81e-04 ]
C [ -3.48e-04 2.51e-03 1.54e-02 -4.70e-04 1.17e-01 3.08e-06 -1.92e-04 8.98e-06 1.20e-01 1.25e-01 -2.61e-04 3.82e-04 2.63e-02 ]
G [ 3.73e-02 2.70e-02 -1.52e-04 5.34e-02 5.40e-05 2.45e-04 8.05e-02 8.60e-05 2.38e-04 6.80e-06 9.41e-04 2.77e-02 2.94e-03 ]
T [ -5.17e-04 6.75e-04 9.59e-04 -1.20e-03 6.51e-05 1.02e-01 -3.37e-05 9.97e-02 1.24e-04 1.81e-05 -1.59e-04 -5.16e-05 1.88e-04 ]

Frequency matrix

A [ 1960 895 3427 1442 39 129 421 272 13 40 6900 2369 1511 ]
C [ 706 2617 3901 853 10480 77 1038 81 10557 10560 1368 2033 3222 ]
G [ 6640 5407 551 7058 47 92 8748 398 9 23 1178 3834 4236 ]
T [ 1433 1821 2860 1386 173 10441 531 9988 160 116 1293 2503 1770 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
Showing 10 profiles of page 1 from 3 pages