Detailed information of deep learning profile BP000017.1

This page shows detailed deep learning-derived predictions and motifs for REST in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000017.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BMW
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.23e-04 -1.05e-03 1.16e-02 2.40e-04 -1.24e-05 4.79e-05 2.67e-04 2.10e-04 3.52e-05 -1.86e-07 5.14e-02 2.72e-03 -6.81e-04 ]
C [ -3.48e-04 2.51e-03 1.54e-02 -4.70e-04 1.17e-01 3.08e-06 -1.92e-04 8.98e-06 1.20e-01 1.25e-01 -2.61e-04 3.82e-04 2.63e-02 ]
G [ 3.73e-02 2.70e-02 -1.52e-04 5.34e-02 5.40e-05 2.45e-04 8.05e-02 8.60e-05 2.38e-04 6.80e-06 9.41e-04 2.77e-02 2.94e-03 ]
T [ -5.17e-04 6.75e-04 9.59e-04 -1.20e-03 6.51e-05 1.02e-01 -3.37e-05 9.97e-02 1.24e-04 1.81e-05 -1.59e-04 -5.16e-05 1.88e-04 ]

Frequency matrix

A [ 1960 895 3427 1442 39 129 421 272 13 40 6900 2369 1511 ]
C [ 706 2617 3901 853 10480 77 1038 81 10557 10560 1368 2033 3222 ]
G [ 6640 5407 551 7058 47 92 8748 398 9 23 1178 3834 4236 ]
T [ 1433 1821 2860 1386 173 10441 531 9988 160 116 1293 2503 1770 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
BP000383.1 REST ENCSR867WPH liver Homo sapiens
Showing 10 profiles of page 2 from 3 pages