Detailed information of deep learning profile BP000017.1

This page shows detailed deep learning-derived predictions and motifs for REST in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000017.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BMW
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.23e-04 -1.05e-03 1.16e-02 2.40e-04 -1.24e-05 4.79e-05 2.67e-04 2.10e-04 3.52e-05 -1.86e-07 5.14e-02 2.72e-03 -6.81e-04 ]
C [ -3.48e-04 2.51e-03 1.54e-02 -4.70e-04 1.17e-01 3.08e-06 -1.92e-04 8.98e-06 1.20e-01 1.25e-01 -2.61e-04 3.82e-04 2.63e-02 ]
G [ 3.73e-02 2.70e-02 -1.52e-04 5.34e-02 5.40e-05 2.45e-04 8.05e-02 8.60e-05 2.38e-04 6.80e-06 9.41e-04 2.77e-02 2.94e-03 ]
T [ -5.17e-04 6.75e-04 9.59e-04 -1.20e-03 6.51e-05 1.02e-01 -3.37e-05 9.97e-02 1.24e-04 1.81e-05 -1.59e-04 -5.16e-05 1.88e-04 ]

Frequency matrix

A [ 1960 895 3427 1442 39 129 421 272 13 40 6900 2369 1511 ]
C [ 706 2617 3901 853 10480 77 1038 81 10557 10560 1368 2033 3222 ]
G [ 6640 5407 551 7058 47 92 8748 398 9 23 1178 3834 4236 ]
T [ 1433 1821 2860 1386 173 10441 531 9988 160 116 1293 2503 1770 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages