Detailed information of deep learning profile BP000017.1

This page shows detailed deep learning-derived predictions and motifs for REST in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000017.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BMW
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.88e-04 -5.16e-05 -1.59e-04 1.81e-05 1.24e-04 9.97e-02 -3.37e-05 1.02e-01 6.51e-05 -1.20e-03 9.59e-04 6.75e-04 -5.17e-04 ]
C [ 2.94e-03 2.77e-02 9.41e-04 6.80e-06 2.38e-04 8.60e-05 8.05e-02 2.45e-04 5.40e-05 5.34e-02 -1.52e-04 2.70e-02 3.73e-02 ]
G [ 2.63e-02 3.82e-04 -2.61e-04 1.25e-01 1.20e-01 8.98e-06 -1.92e-04 3.08e-06 1.17e-01 -4.70e-04 1.54e-02 2.51e-03 -3.48e-04 ]
T [ -6.81e-04 2.72e-03 5.14e-02 -1.86e-07 3.52e-05 2.10e-04 2.67e-04 4.79e-05 -1.24e-05 2.40e-04 1.16e-02 -1.05e-03 1.23e-04 ]

Frequency matrix

A [ 1770 2503 1293 116 160 9988 531 10441 173 1386 2860 1821 1433 ]
C [ 4236 3834 1178 23 9 398 8748 92 47 7058 551 5407 6640 ]
G [ 3222 2033 1368 10560 10557 81 1038 77 10480 853 3901 2617 706 ]
T [ 1511 2369 6900 40 13 272 421 129 39 1442 3427 895 1960 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
Showing 10 profiles of page 1 from 3 pages