Detailed information of deep learning profile BP000020.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000020.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR000BNP
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.53e-02 2.04e-02 6.29e-03 8.65e-02 -4.98e-07 1.16e-07 -3.30e-05 -1.26e-03 -2.17e-03 -1.24e-03 -6.69e-04 ]
C [ -7.53e-05 1.21e-03 1.66e-03 4.06e-06 1.25e-05 2.61e-06 -6.68e-06 5.46e-02 2.26e-03 4.26e-04 2.33e-02 ]
G [ 2.93e-03 -7.34e-04 7.77e-04 2.51e-05 1.45e-06 8.20e-02 6.24e-02 -1.35e-04 1.94e-02 2.57e-02 -7.83e-04 ]
T [ -4.75e-04 9.46e-04 -5.63e-04 -2.01e-06 8.39e-02 -8.74e-07 -1.44e-04 -5.12e-04 -1.70e-03 -1.27e-03 -7.67e-04 ]

Frequency matrix

A [ 22208 22164 18009 39143 15 22 531 6059 4450 4534 8153 ]
C [ 4067 6478 9626 1 2 20 155 27448 6614 6633 19643 ]
G [ 9822 4071 8942 24 26 39111 36830 1493 17282 22420 5685 ]
T [ 3075 6459 2594 4 39129 19 1656 4172 10827 5586 5690 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000033.1 YY1 ENCSR000BSY Ishikawa Homo sapiens
BP000047.1 YY1 ENCSR000EUM GM12878 Homo sapiens
BP000051.1 YY1 ENCSR000EWF K562 Homo sapiens
BP000054.1 YY1 ENCSR000EXG NT2/D1 Homo sapiens
BP000112.1 YY1 ENCSR382MOM liver Homo sapiens
BP000176.1 YY1 ENCSR859RAO HEK293 Homo sapiens
BP000190.1 YY1 ENCSR994YLZ liver Homo sapiens
Showing 7 profiles of page 2 from 2 pages