Detailed information of deep learning profile BP000020.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000020.1
Cell line/tissue: GM12878
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR000BNP
Model: BPNet

Contribution weight matrix (CWM)

A [ -7.67e-04 -1.27e-03 -1.70e-03 -5.12e-04 -1.44e-04 -8.74e-07 8.39e-02 -2.01e-06 -5.63e-04 9.46e-04 -4.75e-04 ]
C [ -7.83e-04 2.57e-02 1.94e-02 -1.35e-04 6.24e-02 8.20e-02 1.45e-06 2.51e-05 7.77e-04 -7.34e-04 2.93e-03 ]
G [ 2.33e-02 4.26e-04 2.26e-03 5.46e-02 -6.68e-06 2.61e-06 1.25e-05 4.06e-06 1.66e-03 1.21e-03 -7.53e-05 ]
T [ -6.69e-04 -1.24e-03 -2.17e-03 -1.26e-03 -3.30e-05 1.16e-07 -4.98e-07 8.65e-02 6.29e-03 2.04e-02 2.53e-02 ]

Frequency matrix

A [ 5690 5586 10827 4172 1656 19 39129 4 2594 6459 3075 ]
C [ 5685 22420 17282 1493 36830 39111 26 24 8942 4071 9822 ]
G [ 19643 6633 6614 27448 155 20 2 1 9626 6478 4067 ]
T [ 8153 4534 4450 6059 531 22 15 39143 18009 22164 22208 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000009.1 YY1 ENCSR000BKD H1 Homo sapiens
BP000011.1 YY1 ENCSR000BKJ GM12891 Homo sapiens
BP000013.1 YY1 ENCSR000BKU K562 Homo sapiens
BP000014.1 YY1 ENCSR000BLT GM12892 Homo sapiens
BP000015.1 YY1 ENCSR000BLZ SK-N-SH Homo sapiens
BP000016.1 YY1 ENCSR000BMH K562 Homo sapiens
BP000021.1 YY1 ENCSR000BNT HepG2 Homo sapiens
BP000022.1 YY1 ENCSR000BNX HCT116 Homo sapiens
BP000028.1 YY1 ENCSR000BPM A549 Homo sapiens
BP000031.1 YY1 ENCSR000BSM SK-N-SH Homo sapiens
Showing 10 profiles of page 1 from 2 pages