Detailed information of deep learning profile BP000022.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000022.1
Cell line/tissue: HCT116
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR000BNX
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.45e-04 -5.55e-04 -2.03e-03 -2.43e-04 -5.80e-05 -5.04e-07 1.13e-01 0.00e+00 -1.42e-04 1.18e-03 -2.61e-04 ]
C [ -6.75e-04 2.85e-02 3.00e-02 -2.87e-05 7.90e-02 8.90e-02 -2.36e-06 1.30e-05 -3.67e-04 -6.50e-04 3.35e-03 ]
G [ 2.64e-02 -3.69e-05 2.05e-03 7.48e-02 -1.60e-06 2.74e-06 3.62e-06 0.00e+00 4.94e-04 1.29e-03 -2.77e-04 ]
T [ -4.56e-04 -1.54e-03 -1.97e-03 -4.67e-04 -7.84e-06 0.00e+00 0.00e+00 1.18e-01 4.79e-03 2.78e-02 3.87e-02 ]

Frequency matrix

A [ 1874 1966 3533 980 410 86 15257 6 1190 2099 1135 ]
C [ 2131 9142 7492 179 14701 15086 13 24 4015 1804 4208 ]
G [ 8664 2493 2734 12343 59 90 21 1 4355 2915 1262 ]
T [ 2627 1695 1537 1794 126 34 5 15265 5736 8478 8692 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000033.1 YY1 ENCSR000BSY Ishikawa Homo sapiens
BP000047.1 YY1 ENCSR000EUM GM12878 Homo sapiens
BP000051.1 YY1 ENCSR000EWF K562 Homo sapiens
BP000054.1 YY1 ENCSR000EXG NT2/D1 Homo sapiens
BP000112.1 YY1 ENCSR382MOM liver Homo sapiens
BP000176.1 YY1 ENCSR859RAO HEK293 Homo sapiens
BP000190.1 YY1 ENCSR994YLZ liver Homo sapiens
Showing 7 profiles of page 2 from 2 pages