Detailed information of deep learning profile BP000024.1

This page shows detailed deep learning-derived predictions and motifs for REST in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000024.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BOT
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.30e-04 2.07e-04 -1.51e-04 4.35e-06 1.49e-04 7.54e-02 -1.39e-05 8.89e-02 5.38e-06 -4.92e-04 -1.28e-04 1.71e-04 -2.16e-04 ]
C [ 1.84e-03 1.97e-02 8.19e-04 1.68e-04 -4.73e-06 9.95e-05 8.00e-02 0.00e+00 3.53e-04 4.18e-02 -2.72e-05 3.55e-02 3.70e-02 ]
G [ 2.62e-02 2.69e-04 -3.56e-04 1.06e-01 9.46e-02 2.26e-04 -6.34e-05 0.00e+00 1.03e-01 -2.79e-04 1.18e-02 8.31e-04 2.76e-04 ]
T [ -2.27e-04 2.96e-03 4.03e-02 0.00e+00 0.00e+00 -1.98e-05 6.32e-06 0.00e+00 4.11e-08 5.85e-04 1.44e-02 -2.88e-04 6.53e-05 ]

Frequency matrix

A [ 871 1486 721 73 154 5070 66 5516 98 799 1237 790 675 ]
C [ 2534 1929 627 5 9 296 5063 13 9 3593 153 3446 3876 ]
G [ 1410 814 424 5555 5450 37 368 12 5513 384 2069 1020 175 ]
T [ 826 1412 3869 8 28 238 144 100 21 865 2182 385 915 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
BP000383.1 REST ENCSR867WPH liver Homo sapiens
Showing 10 profiles of page 2 from 3 pages