Detailed information of deep learning profile BP000024.1

This page shows detailed deep learning-derived predictions and motifs for REST in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000024.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BOT
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.30e-04 2.07e-04 -1.51e-04 4.35e-06 1.49e-04 7.54e-02 -1.39e-05 8.89e-02 5.38e-06 -4.92e-04 -1.28e-04 1.71e-04 -2.16e-04 ]
C [ 1.84e-03 1.97e-02 8.19e-04 1.68e-04 -4.73e-06 9.95e-05 8.00e-02 0.00e+00 3.53e-04 4.18e-02 -2.72e-05 3.55e-02 3.70e-02 ]
G [ 2.62e-02 2.69e-04 -3.56e-04 1.06e-01 9.46e-02 2.26e-04 -6.34e-05 0.00e+00 1.03e-01 -2.79e-04 1.18e-02 8.31e-04 2.76e-04 ]
T [ -2.27e-04 2.96e-03 4.03e-02 0.00e+00 0.00e+00 -1.98e-05 6.32e-06 0.00e+00 4.11e-08 5.85e-04 1.44e-02 -2.88e-04 6.53e-05 ]

Frequency matrix

A [ 871 1486 721 73 154 5070 66 5516 98 799 1237 790 675 ]
C [ 2534 1929 627 5 9 296 5063 13 9 3593 153 3446 3876 ]
G [ 1410 814 424 5555 5450 37 368 12 5513 384 2069 1020 175 ]
T [ 826 1412 3869 8 28 238 144 100 21 865 2182 385 915 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages