Detailed information of deep learning profile BP000024.1

This page shows detailed deep learning-derived predictions and motifs for REST in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000024.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BOT
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.30e-04 2.07e-04 -1.51e-04 4.35e-06 1.49e-04 7.54e-02 -1.39e-05 8.89e-02 5.38e-06 -4.92e-04 -1.28e-04 1.71e-04 -2.16e-04 ]
C [ 1.84e-03 1.97e-02 8.19e-04 1.68e-04 -4.73e-06 9.95e-05 8.00e-02 0.00e+00 3.53e-04 4.18e-02 -2.72e-05 3.55e-02 3.70e-02 ]
G [ 2.62e-02 2.69e-04 -3.56e-04 1.06e-01 9.46e-02 2.26e-04 -6.34e-05 0.00e+00 1.03e-01 -2.79e-04 1.18e-02 8.31e-04 2.76e-04 ]
T [ -2.27e-04 2.96e-03 4.03e-02 0.00e+00 0.00e+00 -1.98e-05 6.32e-06 0.00e+00 4.11e-08 5.85e-04 1.44e-02 -2.88e-04 6.53e-05 ]

Frequency matrix

A [ 871 1486 721 73 154 5070 66 5516 98 799 1237 790 675 ]
C [ 2534 1929 627 5 9 296 5063 13 9 3593 153 3446 3876 ]
G [ 1410 814 424 5555 5450 37 368 12 5513 384 2069 1020 175 ]
T [ 826 1412 3869 8 28 238 144 100 21 865 2182 385 915 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
Showing 10 profiles of page 1 from 3 pages