Detailed information of deep learning profile BP000024.1

This page shows detailed deep learning-derived predictions and motifs for REST in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000024.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BOT
Model: BPNet

Contribution weight matrix (CWM)

A [ 6.53e-05 -2.88e-04 1.44e-02 5.85e-04 4.11e-08 0.00e+00 6.32e-06 -1.98e-05 0.00e+00 0.00e+00 4.03e-02 2.96e-03 -2.27e-04 ]
C [ 2.76e-04 8.31e-04 1.18e-02 -2.79e-04 1.03e-01 0.00e+00 -6.34e-05 2.26e-04 9.46e-02 1.06e-01 -3.56e-04 2.69e-04 2.62e-02 ]
G [ 3.70e-02 3.55e-02 -2.72e-05 4.18e-02 3.53e-04 0.00e+00 8.00e-02 9.95e-05 -4.73e-06 1.68e-04 8.19e-04 1.97e-02 1.84e-03 ]
T [ -2.16e-04 1.71e-04 -1.28e-04 -4.92e-04 5.38e-06 8.89e-02 -1.39e-05 7.54e-02 1.49e-04 4.35e-06 -1.51e-04 2.07e-04 2.30e-04 ]

Frequency matrix

A [ 915 385 2182 865 21 100 144 238 28 8 3869 1412 826 ]
C [ 175 1020 2069 384 5513 12 368 37 5450 5555 424 814 1410 ]
G [ 3876 3446 153 3593 9 13 5063 296 9 5 627 1929 2534 ]
T [ 675 790 1237 799 98 5516 66 5070 154 73 721 1486 871 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
Showing 10 profiles of page 1 from 3 pages