Detailed information of deep learning profile BP000025.1

This page shows detailed deep learning-derived predictions and motifs for REST in PFSK-1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000025.1
Cell line/tissue: PFSK-1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BOX
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.05e-03 -7.75e-04 -5.88e-04 -2.37e-05 -6.89e-06 6.78e-02 -3.07e-06 8.97e-02 -5.27e-05 -2.04e-03 -6.59e-04 -6.47e-05 -9.84e-04 ]
C [ 2.35e-03 2.98e-02 1.12e-03 2.24e-06 3.31e-05 7.00e-04 9.42e-02 7.18e-05 1.16e-05 4.84e-02 -4.61e-05 3.60e-02 3.89e-02 ]
G [ 3.44e-02 6.53e-04 -2.84e-05 1.18e-01 1.20e-01 1.09e-04 2.07e-04 8.04e-05 1.21e-01 -3.30e-04 1.69e-02 2.79e-03 -1.67e-06 ]
T [ -1.78e-03 8.36e-04 4.02e-02 -4.21e-06 1.06e-04 -2.00e-04 -1.40e-04 1.46e-05 3.09e-05 -3.66e-05 8.15e-03 -1.09e-03 -1.12e-03 ]

Frequency matrix

A [ 1377 1748 921 74 139 8042 63 8854 78 1529 2067 1471 1198 ]
C [ 3027 3695 695 20 4 538 8080 16 12 5581 325 4953 5704 ]
G [ 3093 1305 619 8845 8795 59 560 23 8854 616 3291 1858 448 ]
T [ 1454 2203 6716 12 13 312 248 58 7 1225 3267 670 1601 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
BP000383.1 REST ENCSR867WPH liver Homo sapiens
Showing 10 profiles of page 2 from 3 pages