Detailed information of deep learning profile BP000025.1

This page shows detailed deep learning-derived predictions and motifs for REST in PFSK-1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000025.1
Cell line/tissue: PFSK-1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BOX
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.12e-03 -1.09e-03 8.15e-03 -3.66e-05 3.09e-05 1.46e-05 -1.40e-04 -2.00e-04 1.06e-04 -4.21e-06 4.02e-02 8.36e-04 -1.78e-03 ]
C [ -1.67e-06 2.79e-03 1.69e-02 -3.30e-04 1.21e-01 8.04e-05 2.07e-04 1.09e-04 1.20e-01 1.18e-01 -2.84e-05 6.53e-04 3.44e-02 ]
G [ 3.89e-02 3.60e-02 -4.61e-05 4.84e-02 1.16e-05 7.18e-05 9.42e-02 7.00e-04 3.31e-05 2.24e-06 1.12e-03 2.98e-02 2.35e-03 ]
T [ -9.84e-04 -6.47e-05 -6.59e-04 -2.04e-03 -5.27e-05 8.97e-02 -3.07e-06 6.78e-02 -6.89e-06 -2.37e-05 -5.88e-04 -7.75e-04 -1.05e-03 ]

Frequency matrix

A [ 1601 670 3267 1225 7 58 248 312 13 12 6716 2203 1454 ]
C [ 448 1858 3291 616 8854 23 560 59 8795 8845 619 1305 3093 ]
G [ 5704 4953 325 5581 12 16 8080 538 4 20 695 3695 3027 ]
T [ 1198 1471 2067 1529 78 8854 63 8042 139 74 921 1748 1377 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
Showing 10 profiles of page 1 from 3 pages