Detailed information of deep learning profile BP000026.1

This page shows detailed deep learning-derived predictions and motifs for SP1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP1
Model ID: BP000026.1
Cell line/tissue: A549
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0079.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: M9PJG1  
Source: ENCSR000BPE
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.33e-04 -1.51e-04 1.06e-05 -3.75e-05 4.93e-04 -4.87e-04 -3.38e-04 -2.79e-04 2.93e-06 -4.48e-06 -6.73e-04 0.00e+00 -1.60e-05 3.64e-04 8.06e-04 -1.90e-04 ]
C [ 4.09e-03 3.07e-03 2.02e-03 2.44e-03 1.47e-03 1.49e-03 2.93e-04 2.41e-04 2.84e-04 8.05e-05 2.02e-02 0.00e+00 1.67e-04 1.17e-04 2.03e-04 8.43e-03 ]
G [ 3.48e-03 3.74e-03 4.18e-03 3.35e-03 2.83e-03 7.29e-03 1.08e-02 1.76e-02 2.32e-02 2.76e-02 9.99e-04 3.25e-02 1.80e-02 9.75e-03 9.00e-03 1.15e-03 ]
T [ -2.14e-04 -5.31e-04 -5.76e-04 -6.16e-04 -9.40e-04 -6.09e-04 -3.03e-04 -1.19e-04 -2.01e-05 0.00e+00 -5.72e-04 0.00e+00 -2.66e-05 -2.69e-04 -9.78e-05 4.74e-05 ]

Frequency matrix

A [ 14386 15357 13200 13762 18921 12477 10708 7803 1220 139 9303 162 1770 14042 13153 12227 ]
C [ 20816 20152 19814 21514 18231 14597 8938 6703 3016 1372 62483 43 5213 8475 8707 32197 ]
G [ 32741 32368 35426 32193 28270 45356 52636 62927 75097 78107 2655 79423 68509 51930 52185 24318 ]
T [ 11741 11807 11244 12216 14262 7255 7401 2251 351 66 5243 56 4192 5237 5638 10943 ]

6 profiles found for the same TF (SP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000008.1 SP1 ENCSR000BJX HepG2 Homo sapiens
BP000012.1 SP1 ENCSR000BKO K562 Homo sapiens
BP000067.1 SP1 ENCSR085IXF liver Homo sapiens
BP000141.1 SP1 ENCSR583CGO WTC11 Homo sapiens
BP000286.1 SP1 ENCSR000BIR H1 Homo sapiens
BP001069.1 SP1 ENCSR991ELG K562 Homo sapiens
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