Detailed information of deep learning profile BP000026.1

This page shows detailed deep learning-derived predictions and motifs for SP1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP1
Model ID: BP000026.1
Cell line/tissue: A549
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0079.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: M9PJG1  
Source: ENCSR000BPE
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.74e-05 -9.78e-05 -2.69e-04 -2.66e-05 0.00e+00 -5.72e-04 0.00e+00 -2.01e-05 -1.19e-04 -3.03e-04 -6.09e-04 -9.40e-04 -6.16e-04 -5.76e-04 -5.31e-04 -2.14e-04 ]
C [ 1.15e-03 9.00e-03 9.75e-03 1.80e-02 3.25e-02 9.99e-04 2.76e-02 2.32e-02 1.76e-02 1.08e-02 7.29e-03 2.83e-03 3.35e-03 4.18e-03 3.74e-03 3.48e-03 ]
G [ 8.43e-03 2.03e-04 1.17e-04 1.67e-04 0.00e+00 2.02e-02 8.05e-05 2.84e-04 2.41e-04 2.93e-04 1.49e-03 1.47e-03 2.44e-03 2.02e-03 3.07e-03 4.09e-03 ]
T [ -1.90e-04 8.06e-04 3.64e-04 -1.60e-05 0.00e+00 -6.73e-04 -4.48e-06 2.93e-06 -2.79e-04 -3.38e-04 -4.87e-04 4.93e-04 -3.75e-05 1.06e-05 -1.51e-04 -2.33e-04 ]

Frequency matrix

A [ 10943 5638 5237 4192 56 5243 66 351 2251 7401 7255 14262 12216 11244 11807 11741 ]
C [ 24318 52185 51930 68509 79423 2655 78107 75097 62927 52636 45356 28270 32193 35426 32368 32741 ]
G [ 32197 8707 8475 5213 43 62483 1372 3016 6703 8938 14597 18231 21514 19814 20152 20816 ]
T [ 12227 13153 14042 1770 162 9303 139 1220 7803 10708 12477 18921 13762 13200 15357 14386 ]

6 profiles found for the same TF (SP1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000008.1 SP1 ENCSR000BJX HepG2 Homo sapiens
BP000012.1 SP1 ENCSR000BKO K562 Homo sapiens
BP000067.1 SP1 ENCSR085IXF liver Homo sapiens
BP000141.1 SP1 ENCSR583CGO WTC11 Homo sapiens
BP000286.1 SP1 ENCSR000BIR H1 Homo sapiens
BP001069.1 SP1 ENCSR991ELG K562 Homo sapiens
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