Detailed information of deep learning profile BP000027.1

This page shows detailed deep learning-derived predictions and motifs for REST in Panc1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000027.1
Cell line/tissue: Panc1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BPK
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.70e-02 -1.77e-03 4.78e-04 -1.22e-03 -1.87e-03 -7.82e-05 -1.39e-04 1.03e-01 -3.12e-06 1.17e-01 1.38e-05 -1.96e-03 -4.67e-04 -1.22e-03 -1.03e-03 ]
C [ 4.97e-03 3.36e-02 1.96e-02 2.36e-02 5.41e-03 1.18e-04 -5.67e-06 4.11e-04 1.13e-01 1.67e-04 1.88e-04 8.64e-02 -2.91e-04 5.58e-02 5.79e-02 ]
G [ 1.13e-02 4.25e-04 2.04e-02 2.33e-03 -1.01e-03 1.45e-01 1.43e-01 1.83e-04 1.92e-04 1.70e-05 1.65e-01 -4.77e-04 2.73e-02 3.08e-03 -4.09e-05 ]
T [ -2.49e-03 1.11e-03 -3.50e-03 -8.08e-04 4.98e-02 -9.19e-05 5.42e-04 4.44e-04 -1.74e-04 -1.33e-05 -1.84e-05 -1.13e-03 1.46e-02 -9.00e-04 -8.16e-04 ]

Frequency matrix

A [ 1327 307 315 652 235 17 37 2294 36 2498 20 237 515 266 205 ]
C [ 422 1453 1280 919 397 21 3 140 2279 38 2 1973 37 1734 1943 ]
G [ 552 362 658 403 189 2508 2478 29 192 10 2534 123 952 448 71 ]
T [ 256 435 304 583 1736 11 39 94 50 11 1 224 1053 109 338 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
BP000383.1 REST ENCSR867WPH liver Homo sapiens
Showing 10 profiles of page 2 from 3 pages