Detailed information of deep learning profile BP000027.1

This page shows detailed deep learning-derived predictions and motifs for REST in Panc1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000027.1
Cell line/tissue: Panc1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BPK
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.70e-02 -1.77e-03 4.78e-04 -1.22e-03 -1.87e-03 -7.82e-05 -1.39e-04 1.03e-01 -3.12e-06 1.17e-01 1.38e-05 -1.96e-03 -4.67e-04 -1.22e-03 -1.03e-03 ]
C [ 4.97e-03 3.36e-02 1.96e-02 2.36e-02 5.41e-03 1.18e-04 -5.67e-06 4.11e-04 1.13e-01 1.67e-04 1.88e-04 8.64e-02 -2.91e-04 5.58e-02 5.79e-02 ]
G [ 1.13e-02 4.25e-04 2.04e-02 2.33e-03 -1.01e-03 1.45e-01 1.43e-01 1.83e-04 1.92e-04 1.70e-05 1.65e-01 -4.77e-04 2.73e-02 3.08e-03 -4.09e-05 ]
T [ -2.49e-03 1.11e-03 -3.50e-03 -8.08e-04 4.98e-02 -9.19e-05 5.42e-04 4.44e-04 -1.74e-04 -1.33e-05 -1.84e-05 -1.13e-03 1.46e-02 -9.00e-04 -8.16e-04 ]

Frequency matrix

A [ 1327 307 315 652 235 17 37 2294 36 2498 20 237 515 266 205 ]
C [ 422 1453 1280 919 397 21 3 140 2279 38 2 1973 37 1734 1943 ]
G [ 552 362 658 403 189 2508 2478 29 192 10 2534 123 952 448 71 ]
T [ 256 435 304 583 1736 11 39 94 50 11 1 224 1053 109 338 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages