Detailed information of deep learning profile BP000027.1

This page shows detailed deep learning-derived predictions and motifs for REST in Panc1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000027.1
Cell line/tissue: Panc1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BPK
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.16e-04 -9.00e-04 1.46e-02 -1.13e-03 -1.84e-05 -1.33e-05 -1.74e-04 4.44e-04 5.42e-04 -9.19e-05 4.98e-02 -8.08e-04 -3.50e-03 1.11e-03 -2.49e-03 ]
C [ -4.09e-05 3.08e-03 2.73e-02 -4.77e-04 1.65e-01 1.70e-05 1.92e-04 1.83e-04 1.43e-01 1.45e-01 -1.01e-03 2.33e-03 2.04e-02 4.25e-04 1.13e-02 ]
G [ 5.79e-02 5.58e-02 -2.91e-04 8.64e-02 1.88e-04 1.67e-04 1.13e-01 4.11e-04 -5.67e-06 1.18e-04 5.41e-03 2.36e-02 1.96e-02 3.36e-02 4.97e-03 ]
T [ -1.03e-03 -1.22e-03 -4.67e-04 -1.96e-03 1.38e-05 1.17e-01 -3.12e-06 1.03e-01 -1.39e-04 -7.82e-05 -1.87e-03 -1.22e-03 4.78e-04 -1.77e-03 1.70e-02 ]

Frequency matrix

A [ 338 109 1053 224 1 11 50 94 39 11 1736 583 304 435 256 ]
C [ 71 448 952 123 2534 10 192 29 2478 2508 189 403 658 362 552 ]
G [ 1943 1734 37 1973 2 38 2279 140 3 21 397 919 1280 1453 422 ]
T [ 205 266 515 237 20 2498 36 2294 37 17 235 652 315 307 1327 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
Showing 10 profiles of page 1 from 3 pages