Detailed information of deep learning profile BP000028.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000028.1
Cell line/tissue: A549
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR000BPM
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.86e-04 -8.59e-04 -2.13e-03 -1.34e-04 -4.70e-05 5.40e-07 9.52e-02 3.26e-05 -6.43e-05 9.21e-04 -3.71e-04 ]
C [ -8.43e-04 2.53e-02 2.31e-02 -2.21e-05 7.17e-02 7.62e-02 9.19e-07 4.46e-06 9.89e-04 -5.28e-04 2.59e-03 ]
G [ 2.48e-02 3.68e-04 3.49e-03 6.90e-02 -2.53e-06 1.40e-06 5.88e-07 -6.04e-07 2.75e-04 7.21e-04 -1.07e-04 ]
T [ -1.05e-03 -1.10e-03 -1.30e-03 -3.69e-04 -7.18e-06 -2.70e-06 -1.12e-06 9.36e-02 3.66e-03 2.29e-02 3.05e-02 ]

Frequency matrix

A [ 2172 2181 4103 1241 547 53 16844 12 1473 2536 1213 ]
C [ 2160 9872 8008 142 16226 16769 15 26 4540 2029 4338 ]
G [ 9679 2874 3132 13538 61 33 22 6 4883 2979 1580 ]
T [ 2877 1961 1644 1967 54 33 7 16844 5992 9344 9756 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000009.1 YY1 ENCSR000BKD H1 Homo sapiens
BP000011.1 YY1 ENCSR000BKJ GM12891 Homo sapiens
BP000013.1 YY1 ENCSR000BKU K562 Homo sapiens
BP000014.1 YY1 ENCSR000BLT GM12892 Homo sapiens
BP000015.1 YY1 ENCSR000BLZ SK-N-SH Homo sapiens
BP000016.1 YY1 ENCSR000BMH K562 Homo sapiens
BP000020.1 YY1 ENCSR000BNP GM12878 Homo sapiens
BP000021.1 YY1 ENCSR000BNT HepG2 Homo sapiens
BP000022.1 YY1 ENCSR000BNX HCT116 Homo sapiens
BP000031.1 YY1 ENCSR000BSM SK-N-SH Homo sapiens
Showing 10 profiles of page 1 from 2 pages