Detailed information of deep learning profile BP000028.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000028.1
Cell line/tissue: A549
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR000BPM
Model: BPNet

Contribution weight matrix (CWM)

A [ -2.86e-04 -8.59e-04 -2.13e-03 -1.34e-04 -4.70e-05 5.40e-07 9.52e-02 3.26e-05 -6.43e-05 9.21e-04 -3.71e-04 ]
C [ -8.43e-04 2.53e-02 2.31e-02 -2.21e-05 7.17e-02 7.62e-02 9.19e-07 4.46e-06 9.89e-04 -5.28e-04 2.59e-03 ]
G [ 2.48e-02 3.68e-04 3.49e-03 6.90e-02 -2.53e-06 1.40e-06 5.88e-07 -6.04e-07 2.75e-04 7.21e-04 -1.07e-04 ]
T [ -1.05e-03 -1.10e-03 -1.30e-03 -3.69e-04 -7.18e-06 -2.70e-06 -1.12e-06 9.36e-02 3.66e-03 2.29e-02 3.05e-02 ]

Frequency matrix

A [ 2172 2181 4103 1241 547 53 16844 12 1473 2536 1213 ]
C [ 2160 9872 8008 142 16226 16769 15 26 4540 2029 4338 ]
G [ 9679 2874 3132 13538 61 33 22 6 4883 2979 1580 ]
T [ 2877 1961 1644 1967 54 33 7 16844 5992 9344 9756 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000033.1 YY1 ENCSR000BSY Ishikawa Homo sapiens
BP000047.1 YY1 ENCSR000EUM GM12878 Homo sapiens
BP000051.1 YY1 ENCSR000EWF K562 Homo sapiens
BP000054.1 YY1 ENCSR000EXG NT2/D1 Homo sapiens
BP000112.1 YY1 ENCSR382MOM liver Homo sapiens
BP000176.1 YY1 ENCSR859RAO HEK293 Homo sapiens
BP000190.1 YY1 ENCSR994YLZ liver Homo sapiens
Showing 7 profiles of page 2 from 2 pages