Detailed information of deep learning profile BP000032.1

This page shows detailed deep learning-derived predictions and motifs for REST in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000032.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BSP
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.64e-04 -1.01e-03 1.41e-02 3.15e-04 -4.13e-05 3.95e-06 -2.91e-05 -3.44e-05 1.15e-05 -1.71e-06 4.81e-02 3.22e-03 -1.09e-03 4.41e-03 -8.84e-04 ]
C [ -2.62e-04 5.90e-04 1.61e-02 -6.85e-04 1.41e-01 -2.01e-06 5.07e-04 -3.79e-05 1.47e-01 1.36e-01 -5.94e-04 4.23e-04 1.87e-02 6.97e-04 4.53e-03 ]
G [ 4.27e-02 3.97e-02 -2.23e-04 5.14e-02 -4.55e-06 4.74e-05 9.28e-02 4.99e-05 1.97e-06 0.00e+00 1.11e-03 1.35e-02 2.91e-02 3.84e-02 2.95e-03 ]
T [ -7.62e-04 2.73e-04 6.53e-04 -2.34e-03 -3.34e-06 1.22e-01 -2.13e-04 9.79e-02 1.22e-05 -3.43e-05 -1.35e-03 4.15e-03 -7.38e-04 8.53e-04 3.61e-02 ]

Frequency matrix

A [ 1060 381 2474 857 3 23 195 149 10 42 4272 1667 885 1232 751 ]
C [ 170 1093 2072 422 5951 11 463 54 5893 5835 542 918 1769 982 1307 ]
G [ 4104 3661 157 3968 11 12 5285 245 8 15 564 2052 2505 2860 1153 ]
T [ 669 867 1300 756 38 5957 60 5555 92 111 625 1366 844 929 2792 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
BP000383.1 REST ENCSR867WPH liver Homo sapiens
Showing 10 profiles of page 2 from 3 pages