Detailed information of deep learning profile BP000032.1

This page shows detailed deep learning-derived predictions and motifs for REST in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000032.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BSP
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.64e-04 -1.01e-03 1.41e-02 3.15e-04 -4.13e-05 3.95e-06 -2.91e-05 -3.44e-05 1.15e-05 -1.71e-06 4.81e-02 3.22e-03 -1.09e-03 4.41e-03 -8.84e-04 ]
C [ -2.62e-04 5.90e-04 1.61e-02 -6.85e-04 1.41e-01 -2.01e-06 5.07e-04 -3.79e-05 1.47e-01 1.36e-01 -5.94e-04 4.23e-04 1.87e-02 6.97e-04 4.53e-03 ]
G [ 4.27e-02 3.97e-02 -2.23e-04 5.14e-02 -4.55e-06 4.74e-05 9.28e-02 4.99e-05 1.97e-06 0.00e+00 1.11e-03 1.35e-02 2.91e-02 3.84e-02 2.95e-03 ]
T [ -7.62e-04 2.73e-04 6.53e-04 -2.34e-03 -3.34e-06 1.22e-01 -2.13e-04 9.79e-02 1.22e-05 -3.43e-05 -1.35e-03 4.15e-03 -7.38e-04 8.53e-04 3.61e-02 ]

Frequency matrix

A [ 1060 381 2474 857 3 23 195 149 10 42 4272 1667 885 1232 751 ]
C [ 170 1093 2072 422 5951 11 463 54 5893 5835 542 918 1769 982 1307 ]
G [ 4104 3661 157 3968 11 12 5285 245 8 15 564 2052 2505 2860 1153 ]
T [ 669 867 1300 756 38 5957 60 5555 92 111 625 1366 844 929 2792 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages