Detailed information of deep learning profile BP000032.1

This page shows detailed deep learning-derived predictions and motifs for REST in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000032.1
Cell line/tissue: MCF-7
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BSP
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.61e-02 8.53e-04 -7.38e-04 4.15e-03 -1.35e-03 -3.43e-05 1.22e-05 9.79e-02 -2.13e-04 1.22e-01 -3.34e-06 -2.34e-03 6.53e-04 2.73e-04 -7.62e-04 ]
C [ 2.95e-03 3.84e-02 2.91e-02 1.35e-02 1.11e-03 0.00e+00 1.97e-06 4.99e-05 9.28e-02 4.74e-05 -4.55e-06 5.14e-02 -2.23e-04 3.97e-02 4.27e-02 ]
G [ 4.53e-03 6.97e-04 1.87e-02 4.23e-04 -5.94e-04 1.36e-01 1.47e-01 -3.79e-05 5.07e-04 -2.01e-06 1.41e-01 -6.85e-04 1.61e-02 5.90e-04 -2.62e-04 ]
T [ -8.84e-04 4.41e-03 -1.09e-03 3.22e-03 4.81e-02 -1.71e-06 1.15e-05 -3.44e-05 -2.91e-05 3.95e-06 -4.13e-05 3.15e-04 1.41e-02 -1.01e-03 5.64e-04 ]

Frequency matrix

A [ 2792 929 844 1366 625 111 92 5555 60 5957 38 756 1300 867 669 ]
C [ 1153 2860 2505 2052 564 15 8 245 5285 12 11 3968 157 3661 4104 ]
G [ 1307 982 1769 918 542 5835 5893 54 463 11 5951 422 2072 1093 170 ]
T [ 751 1232 885 1667 4272 42 10 149 195 23 3 857 2474 381 1060 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages