Detailed information of deep learning profile BP000033.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000033.1
Cell line/tissue: Ishikawa
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR000BSY
Model: BPNet

Contribution weight matrix (CWM)

A [ -7.11e-04 -7.19e-04 -1.49e-03 -2.31e-04 -7.32e-05 7.54e-07 1.02e-01 0.00e+00 -3.33e-04 7.24e-04 -2.92e-04 ]
C [ -6.46e-04 2.19e-02 2.15e-02 -2.80e-05 6.31e-02 7.82e-02 -6.19e-07 1.71e-06 -7.68e-04 -6.89e-04 3.51e-03 ]
G [ 1.93e-02 4.61e-04 9.91e-04 6.05e-02 -3.05e-07 1.15e-06 5.11e-07 0.00e+00 1.95e-03 1.24e-03 -3.33e-04 ]
T [ -5.42e-04 -1.31e-03 -1.28e-03 -3.60e-04 -6.74e-06 -8.80e-07 0.00e+00 9.49e-02 3.46e-03 1.81e-02 2.49e-02 ]

Frequency matrix

A [ 4134 3973 7356 2128 1536 346 28707 182 2416 4824 3095 ]
C [ 4773 15710 12164 538 26007 28161 16 130 6042 4196 8654 ]
G [ 14558 5830 5324 21696 657 112 10 35 9046 6800 3157 ]
T [ 5282 3234 3903 4385 547 128 14 28400 11243 12926 13841 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000031.1 YY1 ENCSR000BSM SK-N-SH Homo sapiens
BP000047.1 YY1 ENCSR000EUM GM12878 Homo sapiens
BP000051.1 YY1 ENCSR000EWF K562 Homo sapiens
BP000054.1 YY1 ENCSR000EXG NT2/D1 Homo sapiens
BP000112.1 YY1 ENCSR382MOM liver Homo sapiens
BP000176.1 YY1 ENCSR859RAO HEK293 Homo sapiens
BP000190.1 YY1 ENCSR994YLZ liver Homo sapiens
Showing 7 profiles of page 2 from 2 pages