Detailed information of deep learning profile BP000033.1

This page shows detailed deep learning-derived predictions and motifs for YY1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: YY1
Model ID: BP000033.1
Cell line/tissue: Ishikawa
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Best Match(es): MA0095.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q00899  
Source: ENCSR000BSY
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.49e-02 1.81e-02 3.46e-03 9.49e-02 0.00e+00 -8.80e-07 -6.74e-06 -3.60e-04 -1.28e-03 -1.31e-03 -5.42e-04 ]
C [ -3.33e-04 1.24e-03 1.95e-03 0.00e+00 5.11e-07 1.15e-06 -3.05e-07 6.05e-02 9.91e-04 4.61e-04 1.93e-02 ]
G [ 3.51e-03 -6.89e-04 -7.68e-04 1.71e-06 -6.19e-07 7.82e-02 6.31e-02 -2.80e-05 2.15e-02 2.19e-02 -6.46e-04 ]
T [ -2.92e-04 7.24e-04 -3.33e-04 0.00e+00 1.02e-01 7.54e-07 -7.32e-05 -2.31e-04 -1.49e-03 -7.19e-04 -7.11e-04 ]

Frequency matrix

A [ 13841 12926 11243 28400 14 128 547 4385 3903 3234 5282 ]
C [ 3157 6800 9046 35 10 112 657 21696 5324 5830 14558 ]
G [ 8654 4196 6042 130 16 28161 26007 538 12164 15710 4773 ]
T [ 3095 4824 2416 182 28707 346 1536 2128 7356 3973 4134 ]

17 profiles found for the same TF (YY1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000009.1 YY1 ENCSR000BKD H1 Homo sapiens
BP000011.1 YY1 ENCSR000BKJ GM12891 Homo sapiens
BP000013.1 YY1 ENCSR000BKU K562 Homo sapiens
BP000014.1 YY1 ENCSR000BLT GM12892 Homo sapiens
BP000015.1 YY1 ENCSR000BLZ SK-N-SH Homo sapiens
BP000016.1 YY1 ENCSR000BMH K562 Homo sapiens
BP000020.1 YY1 ENCSR000BNP GM12878 Homo sapiens
BP000021.1 YY1 ENCSR000BNT HepG2 Homo sapiens
BP000022.1 YY1 ENCSR000BNX HCT116 Homo sapiens
BP000028.1 YY1 ENCSR000BPM A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages