Detailed information of deep learning profile BP000035.1

This page shows detailed deep learning-derived predictions and motifs for REST in neural cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000035.1
Cell line/tissue: neural cell
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BTV
Model: BPNet

Contribution weight matrix (CWM)

A [ -5.08e-04 -8.79e-05 -6.58e-05 -5.79e-04 -7.28e-04 5.81e-06 0.00e+00 8.85e-03 -1.17e-03 4.82e-05 0.00e+00 1.40e-05 4.94e-04 2.95e-05 -3.21e-05 7.65e-05 3.21e-02 ]
C [ -7.72e-04 4.51e-02 5.69e-05 8.89e-04 -1.56e-06 5.78e-02 6.15e-02 -1.13e-03 1.68e-04 -1.41e-04 1.87e-05 3.13e-05 -1.21e-03 5.33e-02 1.49e-04 -6.83e-05 -5.78e-04 ]
G [ 2.49e-02 4.91e-05 6.77e-05 1.84e-02 -7.83e-04 -4.13e-05 0.00e+00 8.65e-03 -3.35e-04 3.85e-02 6.18e-02 0.00e+00 2.12e-02 -6.06e-06 -1.46e-05 4.60e-02 -4.65e-04 ]
T [ -1.64e-03 -1.50e-04 3.61e-02 7.94e-05 4.44e-02 3.58e-05 -3.16e-04 -2.96e-03 8.94e-03 -9.30e-05 -1.67e-05 5.25e-02 -1.14e-03 -9.55e-05 3.89e-02 -8.56e-05 -5.15e-05 ]

Frequency matrix

A [ 76 16 12 33 15 6 5 332 131 39 3 6 64 1 5 35 624 ]
C [ 91 712 14 121 22 724 731 77 127 10 3 4 103 742 23 5 43 ]
G [ 504 19 25 581 53 7 5 258 78 698 750 1 549 4 5 698 76 ]
T [ 86 10 706 22 667 20 16 90 421 10 1 746 41 10 724 19 14 ]

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
BP000383.1 REST ENCSR867WPH liver Homo sapiens
Showing 10 profiles of page 2 from 3 pages