Detailed information of deep learning profile BP000035.1

This page shows detailed deep learning-derived predictions and motifs for REST in neural cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000035.1
Cell line/tissue: neural cell
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BTV
Model: BPNet

Contribution weight matrix (CWM)

A [ -5.08e-04 -8.79e-05 -6.58e-05 -5.79e-04 -7.28e-04 5.81e-06 0.00e+00 8.85e-03 -1.17e-03 4.82e-05 0.00e+00 1.40e-05 4.94e-04 2.95e-05 -3.21e-05 7.65e-05 3.21e-02 ]
C [ -7.72e-04 4.51e-02 5.69e-05 8.89e-04 -1.56e-06 5.78e-02 6.15e-02 -1.13e-03 1.68e-04 -1.41e-04 1.87e-05 3.13e-05 -1.21e-03 5.33e-02 1.49e-04 -6.83e-05 -5.78e-04 ]
G [ 2.49e-02 4.91e-05 6.77e-05 1.84e-02 -7.83e-04 -4.13e-05 0.00e+00 8.65e-03 -3.35e-04 3.85e-02 6.18e-02 0.00e+00 2.12e-02 -6.06e-06 -1.46e-05 4.60e-02 -4.65e-04 ]
T [ -1.64e-03 -1.50e-04 3.61e-02 7.94e-05 4.44e-02 3.58e-05 -3.16e-04 -2.96e-03 8.94e-03 -9.30e-05 -1.67e-05 5.25e-02 -1.14e-03 -9.55e-05 3.89e-02 -8.56e-05 -5.15e-05 ]

Frequency matrix

A [ 76 16 12 33 15 6 5 332 131 39 3 6 64 1 5 35 624 ]
C [ 91 712 14 121 22 724 731 77 127 10 3 4 103 742 23 5 43 ]
G [ 504 19 25 581 53 7 5 258 78 698 750 1 549 4 5 698 76 ]
T [ 86 10 706 22 667 20 16 90 421 10 1 746 41 10 724 19 14 ]

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages