Detailed information of deep learning profile BP000036.1

This page shows detailed deep learning-derived predictions and motifs for REST in Panc1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000036.1
Cell line/tissue: Panc1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BUP
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.17e-04 -1.02e-03 1.71e-02 -2.80e-04 2.43e-04 -1.20e-06 -4.94e-05 2.63e-05 7.37e-06 -1.42e-07 4.95e-02 1.97e-03 -7.51e-04 4.43e-03 -4.91e-04 ]
C [ -4.15e-04 9.17e-04 2.34e-02 -9.17e-04 1.67e-01 6.42e-06 3.00e-04 -6.72e-05 1.54e-01 1.54e-01 -8.93e-04 3.26e-04 1.43e-02 -2.46e-04 3.94e-03 ]
G [ 4.35e-02 4.03e-02 -3.80e-04 5.75e-02 -2.45e-05 2.93e-04 9.08e-02 -7.17e-05 1.52e-06 0.00e+00 1.70e-03 1.41e-02 2.58e-02 3.90e-02 3.24e-03 ]
T [ -1.02e-03 -5.86e-05 -7.59e-04 -2.41e-03 5.75e-07 1.35e-01 -1.40e-04 1.12e-01 5.48e-05 -4.52e-06 -1.39e-03 3.03e-03 -5.75e-04 1.44e-04 3.14e-02 ]

Frequency matrix

A [ 794 306 1725 619 2 17 162 111 23 9 3036 1133 583 827 473 ]
C [ 168 794 1611 261 4312 7 433 24 4237 4278 332 646 1137 556 836 ]
G [ 2918 2644 83 2915 3 26 3657 136 4 7 462 1385 2010 2394 692 ]
T [ 463 599 924 548 26 4293 91 4072 79 49 513 1179 613 565 2342 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages