Detailed information of deep learning profile BP000036.1

This page shows detailed deep learning-derived predictions and motifs for REST in Panc1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000036.1
Cell line/tissue: Panc1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BUP
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.17e-04 -1.02e-03 1.71e-02 -2.80e-04 2.43e-04 -1.20e-06 -4.94e-05 2.63e-05 7.37e-06 -1.42e-07 4.95e-02 1.97e-03 -7.51e-04 4.43e-03 -4.91e-04 ]
C [ -4.15e-04 9.17e-04 2.34e-02 -9.17e-04 1.67e-01 6.42e-06 3.00e-04 -6.72e-05 1.54e-01 1.54e-01 -8.93e-04 3.26e-04 1.43e-02 -2.46e-04 3.94e-03 ]
G [ 4.35e-02 4.03e-02 -3.80e-04 5.75e-02 -2.45e-05 2.93e-04 9.08e-02 -7.17e-05 1.52e-06 0.00e+00 1.70e-03 1.41e-02 2.58e-02 3.90e-02 3.24e-03 ]
T [ -1.02e-03 -5.86e-05 -7.59e-04 -2.41e-03 5.75e-07 1.35e-01 -1.40e-04 1.12e-01 5.48e-05 -4.52e-06 -1.39e-03 3.03e-03 -5.75e-04 1.44e-04 3.14e-02 ]

Frequency matrix

A [ 794 306 1725 619 2 17 162 111 23 9 3036 1133 583 827 473 ]
C [ 168 794 1611 261 4312 7 433 24 4237 4278 332 646 1137 556 836 ]
G [ 2918 2644 83 2915 3 26 3657 136 4 7 462 1385 2010 2394 692 ]
T [ 463 599 924 548 26 4293 91 4072 79 49 513 1179 613 565 2342 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
BP000383.1 REST ENCSR867WPH liver Homo sapiens
Showing 10 profiles of page 2 from 3 pages