Detailed information of deep learning profile BP000036.1

This page shows detailed deep learning-derived predictions and motifs for REST in Panc1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000036.1
Cell line/tissue: Panc1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BUP
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.17e-04 -1.02e-03 1.71e-02 -2.80e-04 2.43e-04 -1.20e-06 -4.94e-05 2.63e-05 7.37e-06 -1.42e-07 4.95e-02 1.97e-03 -7.51e-04 4.43e-03 -4.91e-04 ]
C [ -4.15e-04 9.17e-04 2.34e-02 -9.17e-04 1.67e-01 6.42e-06 3.00e-04 -6.72e-05 1.54e-01 1.54e-01 -8.93e-04 3.26e-04 1.43e-02 -2.46e-04 3.94e-03 ]
G [ 4.35e-02 4.03e-02 -3.80e-04 5.75e-02 -2.45e-05 2.93e-04 9.08e-02 -7.17e-05 1.52e-06 0.00e+00 1.70e-03 1.41e-02 2.58e-02 3.90e-02 3.24e-03 ]
T [ -1.02e-03 -5.86e-05 -7.59e-04 -2.41e-03 5.75e-07 1.35e-01 -1.40e-04 1.12e-01 5.48e-05 -4.52e-06 -1.39e-03 3.03e-03 -5.75e-04 1.44e-04 3.14e-02 ]

Frequency matrix

A [ 794 306 1725 619 2 17 162 111 23 9 3036 1133 583 827 473 ]
C [ 168 794 1611 261 4312 7 433 24 4237 4278 332 646 1137 556 836 ]
G [ 2918 2644 83 2915 3 26 3657 136 4 7 462 1385 2010 2394 692 ]
T [ 463 599 924 548 26 4293 91 4072 79 49 513 1179 613 565 2342 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages