Detailed information of deep learning profile BP000036.1

This page shows detailed deep learning-derived predictions and motifs for REST in Panc1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000036.1
Cell line/tissue: Panc1
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BUP
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.14e-02 1.44e-04 -5.75e-04 3.03e-03 -1.39e-03 -4.52e-06 5.48e-05 1.12e-01 -1.40e-04 1.35e-01 5.75e-07 -2.41e-03 -7.59e-04 -5.86e-05 -1.02e-03 ]
C [ 3.24e-03 3.90e-02 2.58e-02 1.41e-02 1.70e-03 0.00e+00 1.52e-06 -7.17e-05 9.08e-02 2.93e-04 -2.45e-05 5.75e-02 -3.80e-04 4.03e-02 4.35e-02 ]
G [ 3.94e-03 -2.46e-04 1.43e-02 3.26e-04 -8.93e-04 1.54e-01 1.54e-01 -6.72e-05 3.00e-04 6.42e-06 1.67e-01 -9.17e-04 2.34e-02 9.17e-04 -4.15e-04 ]
T [ -4.91e-04 4.43e-03 -7.51e-04 1.97e-03 4.95e-02 -1.42e-07 7.37e-06 2.63e-05 -4.94e-05 -1.20e-06 2.43e-04 -2.80e-04 1.71e-02 -1.02e-03 2.17e-04 ]

Frequency matrix

A [ 2342 565 613 1179 513 49 79 4072 91 4293 26 548 924 599 463 ]
C [ 692 2394 2010 1385 462 7 4 136 3657 26 3 2915 83 2644 2918 ]
G [ 836 556 1137 646 332 4278 4237 24 433 7 4312 261 1611 794 168 ]
T [ 473 827 583 1133 3036 9 23 111 162 17 2 619 1725 306 794 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages