Detailed information of deep learning profile BP000037.1

This page shows detailed deep learning-derived predictions and motifs for REST in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000037.1
Cell line/tissue: Ishikawa
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR000BUU
Model: BPNet

Contribution weight matrix (CWM)

A [ 8.78e-04 -5.87e-04 -5.42e-04 -1.78e-05 1.01e-04 1.15e-01 -5.03e-05 1.18e-01 -1.67e-05 -1.63e-03 7.07e-04 3.02e-04 -6.58e-04 ]
C [ 8.76e-04 3.11e-02 1.15e-03 2.30e-06 7.78e-05 2.30e-04 1.09e-01 3.34e-04 -6.00e-06 5.62e-02 -2.77e-04 4.62e-02 5.35e-02 ]
G [ 3.39e-02 -5.28e-04 -5.89e-04 1.57e-01 1.43e-01 -8.89e-05 -2.64e-04 -1.07e-06 1.58e-01 -9.47e-04 1.97e-02 8.11e-04 -3.03e-04 ]
T [ -1.68e-03 3.57e-03 5.95e-02 1.97e-06 5.76e-05 -2.25e-05 -7.80e-06 -4.29e-05 2.17e-05 7.85e-04 2.02e-02 -1.16e-03 5.52e-04 ]

Frequency matrix

A [ 1302 2140 1058 117 359 8283 144 8738 99 1276 1971 1270 998 ]
C [ 3739 3451 837 10 18 466 7969 179 32 5834 277 5593 6235 ]
G [ 2895 1294 777 8958 8704 77 671 62 8977 627 3255 1629 337 ]
T [ 1178 2229 6442 29 33 288 330 135 6 1377 3611 622 1543 ]

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
BP000383.1 REST ENCSR867WPH liver Homo sapiens
Showing 10 profiles of page 2 from 3 pages